7 results for “SSR Polymorphism”

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Research ArticleOpen accessEvery word in the titleDevelopment, Polymorphism and Cross-Species Transferability of Genomic SSR Markers in Duabanga Moluccana, an Indigenous Tree Species from SarawakKit-Siong Liew, Wei-Seng Ho, Shek-Ling Pang, Julaihi AbdullahIn this study, we used ISSR-suppression methods to develop a set of SSR markers for Duabanga moluccana. It is an indigenous fast growing tropical tree species. A total of 44 SSR regions were identified and specific primer pairs were designed. The SSR motifs contained perfect compound with 24 (54.5%) occurrences, followed by the imperfect compounds with 8 (18.2%), simple perfect … …OnLine Journal of Biological Sciences, Vol. 16, Issue 1 · 26 Jan 2016 · 7,784 accessesView PDF Cite

Research ArticleOpen accessIn the keywordsAssessment of Genetic Diversity among Elite Breeding Lines of Arabica Coffee (Coffea arabica L.) in Ethiopia using Simple Sequence Repeats MarkersTadesse Benti, Endale Gebre, Kassahun Tesfaye et al.Despite being the center of origin and genetic diversity, there has beenlimited application of molecular markers in arabica coffee breeding inEthiopia. In this study, the extent of genetic diversity and relationships of48 elite breeding lines of arabica coffee from different geographical originswere evaluated using 14 SSR markers. The SSR markers amplified 105 alleles ofwhich 104 are polymorphic with an average … …American Journal of Biochemistry and Biotechnology, Vol. 18, Issue 4 · 25 Nov 2022 · 6,009 accessesView PDF Cite

Research ArticleOpen accessIn the keywordsSSR Analysis of the Chloroplast and Mitochondrial Genomes of Cultivar Lines and Wild Types of the Sunflower (Helianthus L.)Vladimir Arturovich Khachumov, Alexander Vyacheslavovich Usatov, Kirill Vitalievich Azarin et al.SSR analysis of chloroplast and mitochondrial genomes of cultivar lines and wild species of sunflower (Helianthus L.) were completed. The polymorphism of 18 microsatellite loci of the chloroplast and mitochondrial genomes was investigated. Based on the obtained data was constructed dendrogram showing the genetic diversity of chloroplast and mitochondrial genomes of sunflowers. The studied species were clustered into annual and … …American Journal of Biochemistry and Biotechnology, Vol. 16, Issue 1 · 19 Feb 2020 · 7,675 accessesView PDF Cite

Research ArticleOpen accessIn the keywordsSSR Analysis of Maternal and Paternal Lines Selected in the Don Region (Russia)N. V. Markin, A. V. Usatov, V. N. Vasilenko et al.Evaluation of DNA polymorphisms of breeding material of sunflower from L.A. Zhdanov Don Experimental Station of oil Crops of V.S. Pustovoit All-Russian Research Institute of Oil Crops represented by 17 maternal (CMS) lines and 12 paternal (Rf) lines was conducted. There were identified 35 allelic variants of CMS lines and 42 allelic variants of Rf lines with use of 11 … …American Journal of Agricultural and Biological Sciences, Vol. 11, Issue 1 · 16 Jan 2016 · 7,555 accessesView PDF Cite

Research ArticleOpen accessIn the keywordsSSR Analysis of Nuclear DNA of Annual and Perennial Sunflower Species (Helianthus L.)N.V. Markin, A.V. Usatov, A.V. Grinko et al.Genotyping of 29 species of genus Helianthus L., including 5 annual and 24 perennial species from the collection of the N. I. Vavilov All-Russian Institute of Plant Genetic Resources has occurred, for this purpose were selected 52 SSR markers, with localization on all the 17 linkage groups of the sunflower genome. All the studied sunflower samples had unique SSR loci … …OnLine Journal of Biological Sciences, Vol. 20, Issue 2 · 25 Apr 2020 · 6,895 accessesView PDF Cite

Research ArticleOpen accessIn the abstractComparison of Molecular Markers ISSR, SSR and RFLP to Study the Genetic Variation of Strawberry CultivarsGanies Riza Aristya, Rina Kasiamdari, Muhammad Fauzi Arif et al.Strawberry is grown in Indonesia because it has potential high economic value. The purpose of this study was to investigate relationship of phenetic lineage and genetic variations in 12 strawberry cultivars using three different molecular marker methods, including ISSR, SSR and RFLP. Five primers of ISSR markers were used and they generated 53 bands with 44 polymorphic DNA bands. Percentage … …American Journal of Agricultural and Biological Sciences, Vol. 14, Issue 1 · 19 Mar 2019 · 9,182 accessesView PDF Cite

Research ArticleOpen accessIn the abstractAnalysis of Sarawak Bario Rice Diversity Using Microsatellite MarkersS. C. Wong, P. H. Yiu, S. T. W. Bong et al.Problem statement: There are numerous claims on varieties of Bario rice cultivars in Sarawak. Many of them might be synonyms or homonyms. This preliminary study was to differentiate Bario Rice cultivars using microsatellite molecular markers. Approach: Microsatellite marker panels distributed on all 12 chromosomes on rice genome were employed to study 8 Bario rice cultivars in Sarawak. Results: Current study … …American Journal of Agricultural and Biological Sciences, Vol. 4, Issue 4 · 31 Dec 2009 · 9,149 accessesView PDF Cite