Research ArticleOpen accessIn the keywordsA Survey of Protein Fold Recognition AlgorithmsMohammed Said Abual-Rub, Rosni AbdullahProblem statement: Predicting the tertiary structure of proteins from their linear sequence is really a big challenge in biology. This challenge is related to the fact that the traditional computational methods are not powerful enough to search for the correct structure in the huge conformational space. This inadequate capability of the computational methods, however, is a major obstacle in facing … …Journal of Computer Science, Vol. 4, Issue 9 · 30 Sep 2008 · 6,877 accessesView PDFCite
Research ArticleOpen accessIn the abstractPerformance Optimization of Physics Simulations Through Genetic AlgorithmsOksana Shadura, Federico Carminati, Anatoliy PetrenkoThe GeantV R&D approach is revisiting the standard particle transport simulation approach to be able to benefit from “Single Instruction, Multiple Data” (SIMD) computational architectures or extremely parallel systems like coprocessors and GPUs. The goal of this work is to develop a mechanism for optimizing the programs used for High-Energy Physics (HEP) particle transport simulations using a “black-box” optimization approach. … …Journal of Computer Science, Vol. 15, Issue 1 · 8 Jan 2019 · 8,091 accessesView PDFCite