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15 articles for “SSR Markers”
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Research ArticleOpen accessPhrase in the titleValidation of SSR markers associated with Submergence Tolerance in Rice (Oryza sativa L.)Kirill V. Azarin, Alexander V. Usatov, Andrey V. Alabushev et al.The present work is devoted to the validation of SSR markers associated with submergence tolerance (Sub1A) QTLs in rice. It was shown that only microsatellite markers RM 7481 differentiates donor lines and recipient variety. Based upon the results of DNA analysis with the marker of the RM 7481 of the F2-plants, the 14 homozygotes by the locus Sub1A, 40 samples … …American Journal of Agricultural and Biological Sciences, Vol. 11, Issue 4 · 19 Dec 2016 · 7,634 accessesView PDFCite
Research ArticleOpen accessPhrase in the titleDevelopment, Polymorphism and Cross-Species Transferability of Genomic SSR Markers in Duabanga Moluccana, an Indigenous Tree Species from SarawakKit-Siong Liew, Wei-Seng Ho, Shek-Ling Pang, Julaihi AbdullahIn this study, we used ISSR-suppression methods to develop a set of SSR markers for Duabanga moluccana. It is an indigenous fast growing tropical tree species. A total of 44 SSR regions were identified and specific primer pairs were designed. The SSR motifs contained perfect compound with 24 (54.5%) occurrences, followed by the imperfect compounds with 8 (18.2%), simple perfect … …OnLine Journal of Biological Sciences, Vol. 16, Issue 1 · 26 Jan 2016 · 7,784 accessesView PDFCite
Research ArticleOpen accessPhrase in the titleTHE RELATIONSHIP BETWEEN HETEROSIS AND GENETIC DISTANCES BASED ON SSR MARKERS IN HELIANTHUS ANNUUSA. V. Usatov, A. I. Klimenko, K. V. Azarin et al.Identifying the best inbred combinations for the development of commercial hybrid of sunflower remains the main challenge to sunflower breeders. In the present research the level of heterosis of F1 hybrids, genetic diversity of parental lines based on SSR markers, as well as its connection with specific combining ability of sunflower were studied. Ten sunflower elite inbred lines (3 restorer … …American Journal of Agricultural and Biological Sciences, Vol. 9, Issue 3 · 7 Mar 2014 · 8,003 accessesView PDFCite
Research ArticleOpen accessPhrase in the titleDiscrimination Capacity of RAPD, ISSR and SSR Markers and of their Effectiveness in Establishing Genetic Relationship and Diversity among Egyptian and Saudi Wheat CultivarsSalah El-Din El-Assal, Ahmed GaberProblem statement: Yield crop cultivars and landraces are valuable sources of genetic variations that the knowledge and implication of these variations are critical in the plant breeding programs. our major objective of this study is investigating the discriminating capacity of RAPD, ISSR and SSR markers and of their effectiveness in establishing genetic relationship and diversity among Egyptian and Saudi wheat … …American Journal of Applied Sciences, Vol. 9, Issue 5 · 9 Mar 2012 · 7,768 accessesView PDFCite
Research ArticleOpen accessEvery word in the titleComparison of Molecular Markers ISSR, SSR and RFLP to Study the Genetic Variation of Strawberry CultivarsGanies Riza Aristya, Rina Kasiamdari, Muhammad Fauzi Arif et al.Strawberry is grown in Indonesia because it has potential high economic value. The purpose of this study was to investigate relationship of phenetic lineage and genetic variations in 12 strawberry cultivars using three different molecular marker methods, including ISSR, SSR and RFLP. Five primers of ISSR markers were used and they generated 53 bands with 44 polymorphic DNA bands. Percentage … …American Journal of Agricultural and Biological Sciences, Vol. 14, Issue 1 · 19 Mar 2019 · 9,182 accessesView PDFCite
Research ArticleOpen accessIn the keywordsSSR Analysis of Nuclear DNA of Annual and Perennial Sunflower Species (Helianthus L.)N.V. Markin, A.V. Usatov, A.V. Grinko et al.Genotyping of 29 species of genus Helianthus L., including 5 annual and 24 perennial species from the collection of the N. I. Vavilov All-Russian Institute of Plant Genetic Resources has occurred, for this purpose were selected 52 SSR markers, with localization on all the 17 linkage groups of the sunflower genome. All the studied sunflower samples had unique SSR loci … …OnLine Journal of Biological Sciences, Vol. 20, Issue 2 · 25 Apr 2020 · 6,895 accessesView PDFCite
Research ArticleOpen accessIn the keywordsSSR Analysis of the Chloroplast and Mitochondrial Genomes of Cultivar Lines and Wild Types of the Sunflower (Helianthus L.)Vladimir Arturovich Khachumov, Alexander Vyacheslavovich Usatov, Kirill Vitalievich Azarin et al.SSR analysis of chloroplast and mitochondrial genomes of cultivar lines and wild species of sunflower (Helianthus L.) were completed. The polymorphism of 18 microsatellite loci of the chloroplast and mitochondrial genomes was investigated. Based on the obtained data was constructed dendrogram showing the genetic diversity of chloroplast and mitochondrial genomes of sunflowers. The studied species were clustered into annual and … …American Journal of Biochemistry and Biotechnology, Vol. 16, Issue 1 · 19 Feb 2020 · 7,675 accessesView PDFCite
Research ArticleOpen accessIn the keywordsSSR Analysis of Maternal and Paternal Lines Selected in the Don Region (Russia)N. V. Markin, A. V. Usatov, V. N. Vasilenko et al.Evaluation of DNA polymorphisms of breeding material of sunflower from L.A. Zhdanov Don Experimental Station of oil Crops of V.S. Pustovoit All-Russian Research Institute of Oil Crops represented by 17 maternal (CMS) lines and 12 paternal (Rf) lines was conducted. There were identified 35 allelic variants of CMS lines and 42 allelic variants of Rf lines with use of 11 … …American Journal of Agricultural and Biological Sciences, Vol. 11, Issue 1 · 16 Jan 2016 · 7,555 accessesView PDFCite
Research ArticleOpen accessIn the abstractAssessment of Genetic Diversity among Elite Breeding Lines of Arabica Coffee (Coffea arabica L.) in Ethiopia using Simple Sequence Repeats MarkersTadesse Benti, Endale Gebre, Kassahun Tesfaye et al.Despite being the center of origin and genetic diversity, there has beenlimited application of molecular markers in arabica coffee breeding inEthiopia. In this study, the extent of genetic diversity and relationships of48 elite breeding lines of arabica coffee from different geographical originswere evaluated using 14 SSR markers. The SSR markers amplified 105 alleles ofwhich 104 are polymorphic with an average … …American Journal of Biochemistry and Biotechnology, Vol. 18, Issue 4 · 25 Nov 2022 · 6,009 accessesView PDFCite
Research ArticleOpen accessIn the abstractDrought Tolerance and Evaluation of Genetic Changes in Rice Mutant LinesAryanti Amsal, Ishak-ishakThe genetic improvement of rice through mutation induction to obtain drought resistance is essential for stable and adequate rice production would enable us to anticipate the rice yield-reducing effects of global warming. The aim of this research was to evaluate the rice mutant lines showing tolerance to drought condition and their genetic relationship using SSR markers. Mutant lines were obtained … …American Journal of Applied Sciences, Vol. 15, Issue 1 · 16 Jan 2018 · 8,547 accessesView PDFCite