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72 results for “DNA sequence”
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Research ArticleOpen accessPhrase in the titleAn Efficient Distributed Bioinformatics Computing System for DNA Sequence Analysis on Encoding SystemMohammad Ibrahim Khan, Chotan SheelThis study provides an effective design of search technique of a distributed bioinformatics computing system for analysis of DNA sequences using OPTSDNA algorithm. This system could be used for disease detection, criminal forensic analysis, gene prediction, genetic system and protein analysis. Different types of distributed algorithms for the search and identification for DNA segments and repeat pattern in a given … …Current Research in Bioinformatics, Vol. 2, Issue 2 · 20 Dec 2013 · 6,931 accessesView PDFCite
Research ArticleOpen accessPhrase in the titleDNA Sequence Optimization Based on Continuous Particle Swarm Optimization for Reliable DNA Computing and DNA NanotechnologyN. K. Khalid, Z. Ibrahim, T. B. Kurniawan et al.Problem statement: In DNA based computation and DNA nanotechnology, the design of good DNA sequences has turned out to be an essential problem and one of the most practical and important research topics. Basically, the DNA sequence design problem is a multi-objective problem and it can be evaluated using four objective functions, namely, Hmeasure, similarity, continuity and hairpin. Approach: There … …Journal of Computer Science, Vol. 4, Issue 11 · 30 Nov 2008 · 7,046 accessesView PDFCite
Research ArticleOpen accessPhrase in the titlePreliminary Study of Phylogenetic Relationship of Rice Field Chironomidae (Diptera) Inferred From DNA Sequences of Mitochondrial Cytochrome Oxidase Subunit ISalman A. Al-Shami, M.N. Siti Azizah, Che Salmah Md Rawi, Abu Hassan AhmadProblem statement: Chironomidae have been recorded in rice fields throughout the world including in many countries such as India, Australia and the USA. Although some studies provide the key to genera level and note the difficulty of identifying the larvae to species level. Chironomid researches have been hindered because of difficulties in specimen preparation, identification, morphology and literature. Systematics, phylogenetics … …American Journal of Applied Sciences, Vol. 6, Issue 5 · 31 May 2009 · 7,520 accessesView PDFCite
Research ArticleOpen accessEvery word in the titleASSESSING THE GENETIC RELATIONSHIP OF TAIF ROSE WITH SOME ROSE GENOTYPES (ROSA SP.) BASED ON RANDOM AMPLIFIED POLYMORPHIC DNA, INTER SIMPLE SEQUENCE REPEAT AND SIMPLE SEQUENCE REPEAT MARKERSSalah El-Din El-Assal, Mohamed A. El-Awady, Adel El-Tarras, Gaber ShehabTaif-roses are a famous rose type that cultivated in Taif region and well known with their deep and intensive fragrance in the Arabian World. Despite of the great economical importance of Taif-roses for the kingdom of Saudi Arabia, their genetic origin has not been yet elucidated. The present study was mainly aimed to assess the genetic relationship between Taif-roses and … …American Journal of Biochemistry and Biotechnology, Vol. 10, Issue 1 · 29 Apr 2014 · 7,811 accessesView PDFCite
Research ArticleOpen accessIn the keywordsPCR Diagnosis for the Identification of the Virulent Gene of Salmonella in Poultry MeatD. K. Zhanabayeva, A. Y. Paritova, G. K. Murzakaeva et al.The purpose of this study was to conduct microbiological studies of poultry meat imported into Mongolia and establish the serotypes and plasmids of Salmonella and determine the virulence of the gene encoding antibiotic resistance and its transmigratory properties. The PCR molecular biological method was used and according to the results, Salmonella enteritidis was identified in chicken carcasses of the American … …OnLine Journal of Biological Sciences, Vol. 21, Issue 3 · 27 Aug 2021 · 6,865 accessesView PDFCite
Research ArticleOpen accessIn the keywordsGenetic Algorithm Based Probabilistic Motif Discovery in Unaligned Biological SequencesM. Hemalatha, K. VivekanandanFinding motif in biosequences is the most important primitive operation in computational biology. There are many computational requirements for a motif discovery algorithm such as computer memory space requirement and computational complexity. To overcome the complexity of motif discovery, we propose an alternative solution integrating genetic algorithm and Fuzzy Art machine learning approaches for eliminating multiple sequence alignment process. Problem … …Journal of Computer Science, Vol. 4, Issue 8 · 31 Aug 2008 · 6,729 accessesView PDFCite
Research ArticleOpen accessIn the keywordsApplication of RNA-DNA Duplex Base Triplets to Antisense DrugsJie Yang, Yao Leng, Ju BaoSixty-four sets of three-dimensional models of RNA-DNA duplex base triplets were constructed based on codons by homology modeling method using software InsightII on Indigo workstation, which should be helpful for the study of RNA-DNA annealing, the basis of nucleic acids interactions and some peculiar motifs for design antisense oligonucleotides. Our research result reveal that the energies (such as E, Ec, … …American Journal of Biochemistry and Biotechnology, Vol. 1, Issue 2 · 30 Jun 2005 · 6,531 accessesView PDFCite
Research ArticleOpen accessIn the keywordsGenetic Diversity of Some Saudi Barley (Hordeum Vulgare L.) Landraces Based on Two Types of Molecular MarkersMohamed Abdel Hamid Mohamed El-Awady, Adel Ahmed El-Sayed El-Tarras, Salah El-Din El-AssalProblem statement: Very little is known about the genetic diversity and morphological variability present in barley landrace in KSA, a country experiencing loss of biodiversity because of replacement of landraces with modern landraces. Approach: The molecular markers RAPD and ISSR were used as an efficient tools to estimate the intra-and inter-cultivar polymorphism among six barley KSA landraces collected from different … …American Journal of Applied Sciences, Vol. 9, Issue 5 · 12 Mar 2012 · 7,502 accessesView PDFCite
Research ArticleOpen accessIn the keywordsDiscrimination Capacity of RAPD, ISSR and SSR Markers and of their Effectiveness in Establishing Genetic Relationship and Diversity among Egyptian and Saudi Wheat CultivarsSalah El-Din El-Assal, Ahmed GaberProblem statement: Yield crop cultivars and landraces are valuable sources of genetic variations that the knowledge and implication of these variations are critical in the plant breeding programs. our major objective of this study is investigating the discriminating capacity of RAPD, ISSR and SSR markers and of their effectiveness in establishing genetic relationship and diversity among Egyptian and Saudi wheat … …American Journal of Applied Sciences, Vol. 9, Issue 5 · 9 Mar 2012 · 7,768 accessesView PDFCite
Research ArticleOpen accessIn the abstractAnalysis of Morphological and Genetic Diversity of Fruit Flies (Bactrocera spp.) on Chili Plants in East Java, IndonesiaRudi Cahyo Wicaksono, Bambang Tri Raharjo et al.Fruit flies of the genus Bactrocera spp. are important pest that infests many horticultural crops, including chili. With a significant economic impact, the genetic diversity and population dynamics of this pest have not been widely explored. The purpose of this study was to understand the diversity of fruit flies that infest chili in East Java, Indonesia. Morphological characterization was validated … …OnLine Journal of Biological Sciences, Vol. 26, Issue 3 · 22 Aug 2026 · 931 accessesView PDFCite