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39 results for “Phylogenetic Analysis”

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Research ArticleOpen accessIn the abstractGenomic Distance between Thymidylate Synthase and Dihydrofolate Reductase Genes Does Not Correlate With Phylogenetic Evolution in BacteriaVitor Hugo MoreauProblem statement: Dihydrofolate Reductase (DHFR) and Thymidylate Synthase (TS) exist as bifunctional enzymes coded into unique polypeptide chain in protozoans. Bifunctional DHFR-TS is associated with an increase in the enzymatic activity by channeling the substrate between the active sites. In some bacteria, DHFR and TS genes are neighbors in the genome, whereas in others, they are located millions of base … …American Journal of Biochemistry and Biotechnology, Vol. 6, Issue 1 · 31 Mar 2010 · 8,188 accessesView PDFCite
Research ArticleOpen accessIn the abstractIsolation and Characterization of Thermophilic Cellulase-Producing Bacteria from Empty Fruit Bunches-Palm Oil Mill Effluent CompostAzhari Samsu Baharuddin, Mohamad Nafis Abd Razak, Lim Siong Hock et al.Problems statement: Lack of information on locally isolated cellulase-producing bacterium in thermophilic compost using a mixture of Empty Fruit Bunch (EFB) and Palm Oil Mill Effluent (POME) as composting materials. Approach: The isolation of microbes from compost heap was conducted at day 7 of composting process where the mixture of composting materials consisted of 45.8% cellulose, 17.1% hemicellulose and 28.3% … …American Journal of Applied Sciences, Vol. 7, Issue 1 · 31 Jan 2010 · 12,155 accessesView PDFCite
Research ArticleOpen accessIn the abstractCytotoxic and Antimicrobial Potential of Actinomycete Species Saccharopolyspora salina VITSDK4 Isolated from the Bay of Bengal Coast of IndiaK. Suthindhiran, K. KannabiranProblem statement: Although the diversity of marine Actinobacteria have been studied and biotechnologically exploited throughout the world, the studies on marine actinobacteria in Indian peninsula are largely unexplored. Of 9 maritime states in India, only 4 states have been extensively studied for the diversity of actinobacteria. Further, the studies on bioactive actinomycetes from saline soil are very scanty. In the … …American Journal of Infectious Diseases, Vol. 5, Issue 2 · 30 Jun 2009 · 11,440 accessesView PDFCite
Research ArticleOpen accessIn the abstractRadiation Induced DNA Double Strand Break Studies of a Metal Sensitive Novel Bacterial Isolate from East Calcutta WetlandSanhita Chowdhury, Anindita Chakraborty, Ashoke Ranjan Thakur, Shaon Ray ChaudhuriProblem statement: This study was an attempt to isolate anaerobic microbes with potential for DNA double strand break repair using methanogen specific medium (DSMZ 120) from East Calcutta Wetland in India. It also intended to verify the specificity of the medium for isolation of the desired family of microbe. Approach: Culture based technique was used to obtain the pure isolate … …American Journal of Environmental Sciences, Vol. 5, Issue 3 · 30 Jun 2009 · 7,123 accessesView PDFCite
Research ArticleOpen accessIn the abstractPrediction of a Putative Functional Region in the Human Bax Protein by Computational AnalysisMaría Sánchez-Aguilar, Laurence A. Marchat, Absalom ZamoranoStructural domains are relevant elements for interactions between Bcl-2 family members to regulate apoptosis and cell survival. Although BH1-BH4 domains can be identified by their sequence and selective occurrence in Bcl-2-family members, structural regions have not been entirely determined yet. The functional residues of Bax, the most representative pro-apoptotic protein of the human Bcl-2 family, remain almost unknown. Here, we … …American Journal of Infectious Diseases, Vol. 3, Issue 2 · 30 Jun 2007 · 7,230 accessesView PDFCite
Research ArticleOpen accessIn the abstractMolecular Characterization of Soybean Mosaic Virus NIa Protein and its Processing Event in Bacterial ExpressionBong K. Choi, Jae S. Park, Hye J. Ahn et al.Soybean mosaic virus (SMV)-CN18 is an Rsv resistance-breaking (RB) isolate to overcome soybean resistance genes Rsv1, Rsv3 and Rsv4. The aim of this study was to characterize nuclear inclusion protein a (NIa protein) of RB isolate at the molecular level and demonstrate its processing into genome-linked protein (VPg) and NIa-Pro domains in Esherichia coli containing a bacterial expression pET vector … …American Journal of Biochemistry and Biotechnology, Vol. 2, Issue 4 · 31 Dec 2006 · 6,902 accessesView PDFCite
Research ArticleOpen accessAll words, across the recordDiversity of Culturable Halophilic Archaea and Bacteria from Chott Tinsilt and El Malah Salt-Lake in AlgeriaAkmoussi-Toumi Siham, Khemili-Talbi Souad, Kebbouche-Gana Salima et al.At the limits of life, hyper-saline aquatic ecosystems; Chott and Sebkha are a model of choice of extreme environments, housing a halophilic microflora that had to adapt to these conditions. In Algeria, these ecosystems are poorly studied. However, our study was carried out on the waters of Chott Tinsilt and Sebkha El Malah. The study of this microflora revealed the … …Current Research in Bioinformatics, Vol. 8, Issue 1 · 28 Feb 2020 · 7,536 accessesView PDFCite
Research ArticleOpen accessAll words, across the recordPhylogenetic of ERIC-DNA Fingerprinting and New Sequencing of Aeromonas Species and V. Cholerae DNAHawraa Natiq Kabroot AL-Fatlawy, Hawraa Abdalameer Aldahhan, Ali Hmood AlsaadiThe current study included 44 isolate of A. hydrophila, A. sobria and V. cholerae and other bacteria isolated from stool samples and environmental samples (Kufa river water and hospital environmental samples). ERIC DNA Fingerprinting with ERIC primers pairs generated distinct amplification bands ranging in size from (87 bp to 8000 kb). The 44 isolates produced 93 different patterns by ERIC … …American Journal of Applied Sciences, Vol. 14, Issue 10 · 5 May 2017 · 7,801 accessesView PDFCite
Research ArticleOpen accessAll words, across the recordElectrophoretic Analysis of Protein Patterns in Date Palm &#34Khalas&#34 Cultivar Leaflets Among Different Locations of Al-AhsaAl-Issa Adil MohammadProteins extracted from different date palm (Phoenix dactylifera L.) trees &#34Khalas&#34 Cultivar leaflets, which were collected from 10 different locations of Al-Ahsa oasis in the eastern province of Saudi Arabia, have been analyzed by SDS-PAGE electrophoresis. The present study showed different protein patterns, which revealed by NJ and UPGMA clustering methods into three major clusters 1, 2 and 3. Cluster … …American Journal of Agricultural and Biological Sciences, Vol. 8, Issue 4 · 7 Nov 2013 · 7,280 accessesView PDFCite