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Review ArticleOpen accessIn the abstractCriniviruses at the Crossroads of Virology and Agroecology: Molecular Dialogues, Vector Synchrony, and Translational Control Strategies in Crop SystemsMd. Abdullah Al Sabbir, Nabela Akter, Ankita Saha, Md. Motaher HossainCriniviruses, members of the Closteroviridae, illustrate how molecular evolution, vector ecology, and climatic variability converge to determine plant virus emergence and persistence. Although individual genomic and transmission traits are well studied, their cross-scale integration has remained limited. Recent advances in comparative genomics and high-throughput sequencing have revealed that bipartite genome reassortment, recombination hotspots, and quasi-species microdiversity provide the genetic flexibility … …OnLine Journal of Biological Sciences, Vol. 26, Issue 3 · 22 Sep 2026 · 469 accessesView PDFCite
Review ArticleOpen accessIn the abstractAdvances in Modern Biotechnological Tools for Sustainable Control of Plant Viral DiseasesNabela Akter, Ankita Saha, Md. Abdullah Al Sabbir, Md. Motaher HossainPlant viruses pose a major threat to global food production, causing yield losses across many staple and horticultural crops. Conventional breeding for resistance is typically slow and constrained by the number of available natural resistance genes. Recent breakthroughs in biotechnology have enabled the development of accurate, flexible, and environmentally friendly technologies to confer virus resistance. This review summarizes exciting developments … …OnLine Journal of Biological Sciences, Vol. 26, Issue 2 · 16 Jul 2026 · 726 accessesView PDFCite
Research ArticleOpen accessIn the abstractDecoding Lung Cancer: PLAU as a Critical Driver and Diagnostic MarkerStanley Cho, Min Gyeong KimLung cancer remains a leading cause of cancer-related mortality, and understanding its underlying molecular mechanisms is critical for developing targeted therapies. We developed a novel tool called the Transcriptome-TCGA Integration (TTI), which combines in vitro transcriptome data with clinical datasets from the Cancer Genome Atlas (TCGA). TTI allows for the identification of key genes and pathways involved in lung cancer, … …OnLine Journal of Biological Sciences, Vol. 25, Issue 4 · 15 Feb 2026 · 1,424 accessesView PDFCite
Research ArticleOpen accessIn the abstractBiomolecular Identification of Bacteria Endophytic From Betel Leaf in Jambi City Forest Park Area as Antibiotic-Producing PotentialArzita, Miranti Sari Fitriani, Nyimas Myrna Elsa Fathia et al.Background and Objective: Muhammad Sabki City Forest Park in Jambi City has three types of betel plants that contain endophytic bacteria. In 2021, six isolates of endophytic bacteria with the potential for producing antibiotics (halo zone above 10 mm) have been isolated, which can kill Gram-negative (Escherichia coli) and Gram-positive (Staphylococcus aureus) test bacteria. that are 5 (five) isolates derived … …OnLine Journal of Biological Sciences, Vol. 25, Issue 4 · 15 Feb 2026 · 1,234 accessesView PDFCite
Review ArticleOpen accessIn the abstractDecoding Late Blight of Potato and Tomato: Insights into Pathogen Dynamics, Host Interactions and Emerging SolutionsHumayra Ferdus, Mahabuba Mostafa, Dodi Al Sharif, Md. Motaher HossainThe oomycete Phytophthora infestans is the source of late blight, a devastating disease that significantly impacts on tomato and potato cultivation worldwide, threatening food security and causing considerable economic losses. This review explores the epidemiological dynamics of late blight, focusing on the pathogen's life cycle, reproductive strategies, and molecular pathogenesis. Traditional management strategies, including cultural practices, host resistance, and biocontrol … …OnLine Journal of Biological Sciences, Vol. 25, Issue 4 · 5 Feb 2026 · 2,530 accessesView PDFCite
Research ArticleOpen accessIn the abstractCPF-Net: Cross-modal CT and Pathology Guided Feature Learning for CT-based Lung Cancer Subtype ClassificationPeizhi Tan, Debiao YanAccurate classification of lung cancer subtypes from CT images remains challenging due to the subtle radiological differences between adenocarcinoma (LUAD) and squamous cell carcinoma (LUSC). We propose CPF-Net, a deep learning framework that integrates CT and pathological information through a Linear Spatial Reduction Attention (LSRA) module. The framework processes whole slide images using a modified CTransPath architecture for pathological feature … …American Journal of Biochemistry and Biotechnology, Vol. 21, Issue 3 · 23 Jan 2026 · 1,856 accessesView PDFCite
Research ArticleOpen accessIn the abstractCharacterization of a Multi-Metal Resistant Bacillus cereus Strain TWSL_5 and it’s Bioremediation Potential for Cr, Pb, Zn and FeWeerasingha Mudiyanselage Nilmini Hasintha Kumari, Naduviladath Vishvanath Chandrasekharan, Champika Dilrukshi WijayarathnaAn effluent sample collected from a textile dyeing factory was screened to isolate metal resistant endogenous bacteria using standard microbiology techniques. A bacterium with the highest metal resistance was characterized by 16S rRNA gene sequencing and the bacterial genome was screened for any possible metal resistant genes using the Polymerase Chain Reaction (PCR). The bioremoval ability of the isolate was … …American Journal of Environmental Sciences, Vol. 17, Issue 3 · 15 Jul 2021 · 6,443 accessesView PDFCite
Research ArticleOpen accessIn the abstractComparative Genomics of Xylella fastidiosa Subsp. Pauca and Insights on its Current and Potential Movements in EcuadorCarlos Bolanos-Carriel, Eliana Granja Guerra, Jaris Veneros et al.Xylella fastidiosa subsp. Pauca causes Coffee Leaf Scorch (CLS). It is a major threat to coffee production in most South and Central American countries. X. fastidiosa is prone to intersubspecific recombination, and it is believed that this species became pathogenic in citrus and coffee due to recent mutation events and gene flow between closely related strains. CLS epidemics have not … …OnLine Journal of Biological Sciences, Vol. 25, Issue 1 · 23 Nov 2024 · 6,172 accessesView PDFCite
Research ArticleOpen accessIn the abstractSSR Analysis of Nuclear DNA of Annual and Perennial Sunflower Species (Helianthus L.)N.V. Markin, A.V. Usatov, A.V. Grinko et al.Genotyping of 29 species of genus Helianthus L., including 5 annual and 24 perennial species from the collection of the N. I. Vavilov All-Russian Institute of Plant Genetic Resources has occurred, for this purpose were selected 52 SSR markers, with localization on all the 17 linkage groups of the sunflower genome. All the studied sunflower samples had unique SSR loci … …OnLine Journal of Biological Sciences, Vol. 20, Issue 2 · 25 Apr 2020 · 6,895 accessesView PDFCite
Research ArticleOpen accessIn the abstractIdentification of SBP Gene Family and Analysis of Expression Patterns Under Salt Stress in QuinoaWeihai Hou, Jianlin Wang, Zongyu Zhang et al.This study aimed to identify the Squamosa promoter Binding Protein (SBP) transcription factor from the whole genome of quinoa by analyzing its phylogenetic relationship, gene structure, chromosome location, gene replication, upstream cis-regulatory elements, tissue expression, and construction of the SBP protein interaction network, as well as the characteristics of its tissue expression pattern under salt stress. The researchers found that … …American Journal of Biochemistry and Biotechnology, Vol. 19, Issue 1 · 21 Mar 2023 · 5,503 accessesView PDFCite