3 articles for “protein sequence clustering”

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Research ArticleOpen accessPhrase in the titleThe Parallel Maximal Cliques Algorithm for Protein Sequence ClusteringKhalid Jaber, Nur’Aini Abdul Rashid, Rosni AbdullahProblem statement: Protein sequence clustering is a method used to discover relations between proteins. This method groups the proteins based on their common features. It is a core process in protein sequence classification. Graph theory has been used in protein sequence clustering as a means of partitioning the data into groups, where each group constitutes a cluster. Mohseni-Zadeh introduced a … …American Journal of Applied Sciences, Vol. 6, Issue 7 · 31 Jul 2009 · 7,100 accessesView PDF Cite

Research ArticleOpen accessIn the abstractOptimizing N-linked Glycosylation Site Prediction in Human Proteins with Ensemble Stacking and Cross-ValidationMubina Malik, Jaimin UndaviaThe most frequent post-translational modification of proteins in all territories is glycosylation which impacts many biological activities. The most significant and critical of these modifications is N-linked glycosylation which is associated with various human diseases including diabetes cancer Inflammation Alzheimers and atherosclerosis. This article illustrates recent advances in knowledge of biology that are eventually targeting the computer science sector. Moreover-identification … …Journal of Computer Science, Vol. 20, Issue 12 · 20 Nov 2024 · 4,999 accessesView PDF Cite

Research ArticleOpen accessAll words, across the recordImproving Protein 3D Structure Prediction Accuracy using Dense Regions Areas of Secondary Structures in the Contact MapAmer F. Al-Badarneh, Mohammad A. Khalil, Mo'taz A. Al-HamiProblem Statement: The protein folding problem is a fundamental problem in structural molecular biology. This problem describes how a protein is transformed from its primary sequence (i.e., amino acid sequence) into the three dimensional structure (3D structure) for this sequence that determines the function of the protein. The 3D structure of a protein can be represented using a square symmetrical … …American Journal of Biochemistry and Biotechnology, Vol. 4, Issue 4 · 31 Dec 2008 · 7,533 accessesView PDF Cite