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15 articles for “genomics”
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Research ArticleOpen accessEvery word in the titleComparative Genomics of Xylella fastidiosa Subsp. Pauca and Insights on its Current and Potential Movements in EcuadorCarlos Bolanos-Carriel, Eliana Granja Guerra, Jaris Veneros et al.Xylella fastidiosa subsp. Pauca causes Coffee Leaf Scorch (CLS). It is a major threat to coffee production in most South and Central American countries. X. fastidiosa is prone to intersubspecific recombination, and it is believed that this species became pathogenic in citrus and coffee due to recent mutation events and gene flow between closely related strains. CLS epidemics have not … …OnLine Journal of Biological Sciences, Vol. 25, Issue 1 · 23 Nov 2024 · 6,172 accessesView PDFCite
Research ArticleOpen accessEvery word in the titleComparative Genomics of Domesticated and Wild Sunflower: Complete Chloroplast and Mitochondrial GenomesM. S. Makarenko, A. V. Usatov, N. V. Markin et al.The entire chloroplast and mitochondrial genomes of domesticated and wild type sunflower were sequenced. The comparative analysis of chloroplast genomes revealed 43 variant sites, including 21 polymorphic SSR loci and 22 SNPs. About 14 variant sites were found by collation of mitochondrial DNA (mtDNA), among them 4 SSRs, 8 SNPs and 2 deletions. About 9 SNPs were located in coding … …OnLine Journal of Biological Sciences, Vol. 16, Issue 1 · 29 Feb 2016 · 7,775 accessesView PDFCite
Research ArticleOpen accessIn the keywordsBIOENERGETICS, THE FOUNDATION OF THE FUTURE OF CANCER THERAPEUTICS A QUANTUM LEAP IN MAKINGKambiz AfrasiabiDeep understanding of the governing laws of bioenergetics of the living organism and dissection of their aberrancies, could enable us to design new treatment strategies for a vast array of disorders including malignancy and could potentially lead to major breakthroughs and cure of these devastating disorders. The modern treatment strategies currently aim at identification of a pathway considered to be … …OnLine Journal of Biological Sciences, Vol. 12, Issue 3 · 15 Aug 2012 · 7,528 accessesView PDFCite
Research ArticleOpen accessIn the keywordsA Feasibility Study of Challenges and Opportunities in Computational Biology: A Malaysian PerspectiveR. J.A. Richard, N. SriraamThe term computational biology refers to the knowledge derived from a computer analysis of biological data that includes identification of genes in DNA sequence of different organisms, prediction of structural and functional mechanism of proteins, feature extraction and classification of genomics and proteomics. Computational biology is a rapidly developing branch of science and is highly interdisciplinary, using techniques and Concepts … …American Journal of Applied Sciences, Vol. 2, Issue 9 · 30 Sep 2005 · 6,924 accessesView PDFCite
Research ArticleOpen accessIn the keywordsMinimum Free Energy Based Evaluation of mRNAs Secondary Structures Constructed by 18 Clinically Significant Exonic Single Nucleotide Polymorphisms (SNPs) and Haplotypes of 5 Missense SNPs of RB1 GeneSarder Nasir Uddin, Apurba Majumder, Khandker Khaldun Islam et al.Clinically significant 18 Single Nucleotide Polymorphisms (SNPs) from exon regions of Retinoblastoma gene (RB1) were analyzed to find out the structural variations in mRNAs. Online bioinformatic tools i.e., Vienna RNA, RNAfold were used for secondary structure analysis of mRNAs. Predicted minimum Free Energy Change (MFE) was calculated for mRNAs structures. It has been observed that the average of predicted MFE … …American Journal of Biochemistry and Biotechnology, Vol. 11, Issue 4 · 21 Oct 2015 · 8,556 accessesView PDFCite
Review ArticleOpen accessIn the abstractCriniviruses at the Crossroads of Virology and Agroecology: Molecular Dialogues, Vector Synchrony, and Translational Control Strategies in Crop SystemsMd. Abdullah Al Sabbir, Nabela Akter, Ankita Saha, Md. Motaher HossainCriniviruses, members of the Closteroviridae, illustrate how molecular evolution, vector ecology, and climatic variability converge to determine plant virus emergence and persistence. Although individual genomic and transmission traits are well studied, their cross-scale integration has remained limited. Recent advances in comparative genomics and high-throughput sequencing have revealed that bipartite genome reassortment, recombination hotspots, and quasi-species microdiversity provide the genetic flexibility … …OnLine Journal of Biological Sciences, Vol. 26, Issue 3 · 22 Sep 2026 · 469 accessesView PDFCite
Research ArticleOpen accessIn the abstractAI-Guided Anatomical Landmark and Abnormality Detection for Autonomous Endoscopy ExaminationMd Shakhawat Hossain, Munim Ahmed et al.Aabakken, L., Barkun, A. N., Cotton, P. B., Fedorov, E., Fujino, M. A., Ivanova, E., Kudo, S., Kuznetzov, K., De Lange, T., Matsuda, K., Moine, O., Rembacken, B., Rey, J., Romagnuolo, J., Rösch, T., Sawhney, M., Yao, K., & Waye, J. D. (2014). Standardized endoscopic reporting. Journal of Gastroenterology and Hepatology, 29(2), 234–240. https://doi.org/10.1111/jgh.12489 Aliyi, S., Dese, K., & Raj, … …Journal of Computer Science, Vol. 20, Issue 8 · 29 May 2024 · 6,783 accessesView PDFCite
EditorialOpen accessIn the abstractFocalize the Structure of Myd88 in TLR Signaling Pathway to Modulate Innate Immune Response: New Target for Old DiseasesShuai Xing, Ping ZhouAll diseases have their Achilles’ Heel to target and this is especially true for immunorelated diseases which must be treated by targeting the immune system somewhere and somehow correctly. In the most recent decade, immunologists recognized that the Toll-Like Receptor (TLR) signaling pathway in innate immune system plays a double-edged role in the pathogenesis of many notorious diseases. Although the … …American Journal of Immunology, Vol. 13, Issue 3 · 6 Sep 2017 · 7,862 accessesView PDFCite
EditorialOpen accessIn the abstractBig Data and Parkinson’s Disease - from Understanding of Disease to Personalised MedicineYen F. Tai, Nicola PaveseThe advancement of information technology in recent years has generated a huge amount of datasets in all areas of scientific research. This has led to new opportunities to harness the 'Big Data' to improve our understanding of diseases - from investigating disease mechanisms to monitoring treatment responses. The Big Data approach is a data-driven and often hypothesis-free, way of studying … …Neuroscience International, Vol. 7, Issue 1 · 27 Jul 2016 · 7,755 accessesView PDFCite
EditorialOpen accessIn the abstractAmerican Journal of Agricultural and Biological Sciences: Ten Years LaterMarco LandiTen years after the first issue, the American Journal of Agricultural and Biological Sciences (AJABS) continued to flourish, a clear indication of the validity of Science Publications project. Many scientists have contributed in this first decade to AJABS editorial life and to date more than 500 papers have been published with an encouraging rate of 0.73 cites per doc. Furthermore, … …American Journal of Agricultural and Biological Sciences, Vol. 11, Issue 1 · 5 Mar 2016 · 7,893 accessesView PDFCite