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55 articles for “Phylogenetic”
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Research ArticleOpen accessEvery word in the titlePhylogenetic Study of Some Strains of DunaliellaDuc Tran, Trung Vo, Sixto Portilla et al.Dunaliella strains were isolated from a key site for salt production in Vietnam (Vinh Hao, Binh Thuan province). The strains were identified based on Internal Transcribed Spacer (ITS) markers. The phylogenetic tree revealed these strains belong to the clades of Dunaliella salina and Dunaliella viridis. Results of this study confirm the ubiquitous nature of Dunaliella and suggest that strains of … …American Journal of Environmental Sciences, Vol. 9, Issue 4 · 28 Aug 2013 · 7,692 accessesView PDFCite
Research ArticleOpen accessEvery word in the titlePhylogenetic of ERIC-DNA Fingerprinting and New Sequencing of Aeromonas Species and V. Cholerae DNAHawraa Natiq Kabroot AL-Fatlawy, Hawraa Abdalameer Aldahhan, Ali Hmood AlsaadiThe current study included 44 isolate of A. hydrophila, A. sobria and V. cholerae and other bacteria isolated from stool samples and environmental samples (Kufa river water and hospital environmental samples). ERIC DNA Fingerprinting with ERIC primers pairs generated distinct amplification bands ranging in size from (87 bp to 8000 kb). The 44 isolates produced 93 different patterns by ERIC … …American Journal of Applied Sciences, Vol. 14, Issue 10 · 5 May 2017 · 7,801 accessesView PDFCite
Review ArticleOpen accessEvery word in the titleCOVID-19: A Review of Current Evidence on Phylogenetics and EtiopathogenesisRafiq Shajahan, Naganathan K. PillaiCOVID-19 represents the latest pandemic caused by the SARS-CoV-2 coronavirus. Coronaviruses are RNA viruses that cause a largely viral mediated immune-related syndrome similar to the SARS epidemic. Following metagenomic sequencing, SARS-CoV-2 closely resembles SARS-CoV (79% similarity) and MERS-CoV virus (50% similarity). Despite this, clinical observations have found varying degrees of infectivity and pathogenesis amongst these viruses. Phylogenetic origins of SARS-CoV-2 … …American Journal of Infectious Diseases, Vol. 17, Issue 1 · 2 Apr 2021 · 6,764 accessesView PDFCite
Research ArticleOpen accessEvery word in the titlePHYLOGENETIC ANALYSIS OF THE SWINE LEUKOCYTE ANTIGEN-6 GENE GENERATED FROM SPLEENTISSUE OF KOREAN NATIVE PIGJaeyoung Kim, Hyojun Park, Yoonchung Choi, Hoyoung ChungThis study was aimed to search genetic variants, to investigate phylogenetic relationships between pig breeds and to provide basic genetic information of Korean Native Pigs (KNP) using the variations of the Swine Leukocyte Antigen-6 (SLA-6) gene. Cloning of the Swine Leukocyte Antigen (SLA)-6 gene in the MHC non-classical region was performed with spleen tissues of Korean Native Pigs (KNP). Sequencing … …American Journal of Animal and Veterinary Sciences, Vol. 9, Issue 1 · 22 Feb 2014 · 7,234 accessesView PDFCite
Research ArticleOpen accessEvery word in the titleGenomic Distance between Thymidylate Synthase and Dihydrofolate Reductase Genes Does Not Correlate With Phylogenetic Evolution in BacteriaVitor Hugo MoreauProblem statement: Dihydrofolate Reductase (DHFR) and Thymidylate Synthase (TS) exist as bifunctional enzymes coded into unique polypeptide chain in protozoans. Bifunctional DHFR-TS is associated with an increase in the enzymatic activity by channeling the substrate between the active sites. In some bacteria, DHFR and TS genes are neighbors in the genome, whereas in others, they are located millions of base … …American Journal of Biochemistry and Biotechnology, Vol. 6, Issue 1 · 31 Mar 2010 · 8,188 accessesView PDFCite
Research ArticleOpen accessEvery word in the titlePreliminary Study of Phylogenetic Relationship of Rice Field Chironomidae (Diptera) Inferred From DNA Sequences of Mitochondrial Cytochrome Oxidase Subunit ISalman A. Al-Shami, M.N. Siti Azizah, Che Salmah Md Rawi, Abu Hassan AhmadProblem statement: Chironomidae have been recorded in rice fields throughout the world including in many countries such as India, Australia and the USA. Although some studies provide the key to genera level and note the difficulty of identifying the larvae to species level. Chironomid researches have been hindered because of difficulties in specimen preparation, identification, morphology and literature. Systematics, phylogenetics … …American Journal of Applied Sciences, Vol. 6, Issue 5 · 31 May 2009 · 7,520 accessesView PDFCite
Literature ReviewOpen accessIn the keywordsA Systematic Review of the Prevalence of Avian Hepatitis E Virus in Bird’s Husbandry Worldwide, 2000-2023 Prevalence of Avian Hepatitis E VirusJorge Eduardo Forero Duarte, Leonardo Alzate Mejía, Jaiberth Antonio Cardona-AriasAvian Hepatitis E virus (aHEV) constitutes a serious animal health problem and involves significant losses in poultry production; however, epidemiological evidence is scattered. Analyze the prevalence of aHEV infection in bird husbandry and its histopathological and phylogenetic characteristics based on scientific publications worldwide from 2000- 2023.Systematic review applying the Johanna Briggs Institute guidelines and the PRISMA guide. Exhaustiveness, reproducibility, and … …American Journal of Animal and Veterinary Sciences, Vol. 19, Issue 4 · 27 Nov 2024 · 4,150 accessesView PDFCite
Research ArticleOpen accessIn the keywordsMolecular Characterization and Differentiation of Proteases Isolated from Different Aspergillus Fungal SpeciesSamia Abd Allah Abdal-Aziz, Safaa M. AliA comparative molecular study of Aperigiullus protease using sequence of protease gene representative 25 different Aspergillus species (Aspergillus fumigatus, Aspergillus oryzae, Aspergillus flavus, Aspergillus novofumigatus, Aspergillus viridinutans, Aspergillus pseudotamarii, Aspergillus clavatus, Aspergillus sojae, Aspergillus fischeri, Aspergillus caelatus, Aspergillus novofumigatus, Aspergillus campestris, Aspergillus costaricaensis, Aspergillus candidus, Aspergillus neoniger, Aspergillus mulundensis, Aspergillus ibericus, Aspergillus niger, Aspergillus piperis, Aspergillus eucalypticola, Aspergillus vadensis, Aspergillus … …OnLine Journal of Biological Sciences, Vol. 21, Issue 1 · 11 Feb 2021 · 6,649 accessesView PDFCite
Research ArticleOpen accessIn the keywordsComparison of IncL/M Plasmids Using the Neighbor-Joining Method on Basis repA and excA GenesTouati Abdelaziz, Mairi AssiaThe aim of this study is to make comparison of IncL/M groups on basis of two genes candidates’ repA and excA genes. The sequences of 27 plasmids were compared using the neighbor-joining method. This method was used to construct a phylogenetic tree for the nucleotide sequences of two genes (repA and excA), using the program MEGA X software. The evolutionary … …Current Research in Bioinformatics, Vol. 8, Issue 1 · 27 Feb 2020 · 7,088 accessesView PDFCite
Research ArticleOpen accessIn the keywordsSeparation and Identification of Two Fungal Strains in Stored MaizeXiaoyu Yue, Lynne McLandsborough, Jian Zou, Xueqin GaoThe microbiological spoilage of stored grain is important for human health and economic loss. Two major predominant grain spoilage fungi (M15 and M16) were isolated from maize from a granary in China. Morphological observation of the fungal isolates, analysis of their ITS sequences and construction of their phylogenetic trees were conducted on these two strains, which were identified as Fusarium … …American Journal of Biochemistry and Biotechnology, Vol. 13, Issue 3 · 3 Aug 2017 · 7,331 accessesView PDFCite