4 articles for “Membrane computing formalism”

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Research ArticleOpen accessPhrase in the titleModeling of Biological Processes by Using Membrane Computing FormalismRavie Chandren Muniyandi, Abdullah Mohd. ZinProblem statement: Membrane computing has structural resemblance with the cell structure. This characteristic provides the versatility in the modeling of biological processes. Approach: This study was carried to discuss the membrane computing formalism in modeling biological processes by analyzing two examples: Photosynthesis in chloroplast and Sodium-Potassium exchange pump. Results: The modeling of these two examples showed membrane computing formalism has … …American Journal of Applied Sciences, Vol. 6, Issue 11 · 30 Nov 2009 · 6,717 accessesView PDF Cite

Research ArticleOpen accessIn the abstractModeling A Multi-Compartments Biological System with Membrane ComputingRavie Chandren Muniyandi, Abdullah Mohd. ZinProblem statement: Most of the biological systems have been hierarchical in structure with processes interacting between different compartments. Membrane computing formalism has provided modeling capabilities in representing the structure of biological systems. Approach: This study was carried to investigate the modeling of a multi-compartment biological system by using membrane computing formalism. The hormone-induced calcium oscillations in liver cells which was … …Journal of Computer Science, Vol. 6, Issue 10 · 10 Aug 2010 · 7,256 accessesView PDF Cite

Research ArticleOpen accessIn the abstractModel Checking the Biological Model of Membrane Computing with Probabilistic Symbolic Model Checker by Using Two Biological SystemsRavie Chandren Muniyandi, Abdullah Mohd. Zin, Zarina ShukorProblem statement: Membrane computing formalism has provided better modeling capabilities for biological systems in comparison to conventional mathematical models. Model checking could be used to reason about the biological system in detail and with precision by verifying formally whether membrane computing model meets the properties of the system. Approach: This study was carried to investigate the preservation of properties of … …Journal of Computer Science, Vol. 6, Issue 7 · 31 Jul 2010 · 6,672 accessesView PDF Cite

Research ArticleOpen accessIn the abstractExperimenting the Simulation Strategy of Membrane Computing with Gillespie Algorithm by Using Two Biological Case StudiesRavie Chandren Muniyandi, Abdullah Mohd ZinProblem statement: The evolution rules of membrane computing have been applied in a nondeterministic and maximally parallel way. In order to capture these characteristics, Gillespie’s algorithm has been used as simulation strategy of membrane computing in simulating biological systems. Approach: This study was carried to discuss the simulation strategy of membrane computing with Gillespie algorithm in comparison to the simulation … …Journal of Computer Science, Vol. 6, Issue 5 · 31 May 2010 · 6,941 accessesView PDF Cite