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11 articles for “High-Throughput Sequencing”
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Research ArticleOpen accessIn the keywordsBacterial Diversity and Community Structure Characteristics in Rhizosphere Soil of Coconut (Cocos nucifera L.) under Intercropping PineappleLilan Lu, Hui Zhu, Yingying Liu et al.To explore the bacterial diversity and community structure characteristics of the rhizosphere soil of fruit type coconuts of different varieties under the intercropping pineapple model, the Illumina high throughput sequencing technology was used to detect the composition and diversity of soil microorganisms. Furthermore, the correlation between the physical and chemical properties of soil and the characteristics of the rhizosphere soil … …American Journal of Biochemistry and Biotechnology, Vol. 19, Issue 1 · 16 Feb 2023 · 5,745 accessesView PDFCite
Review ArticleOpen accessIn the keywordsComparative Study on Microbial Communities of Soil, Grape Must and Wine Fermentation of Cabernet Sauvignon Inoculated with three Commercial Yeast of Saccharomyces cerevisiaeRongbin Li, Xu Shi, Yaqiong Liu et al.This study examined the microbial diversity in soil, grape must and wine fermentation of Cabernet Sauvignon inoculated with three different starters (S01: Xinjiang Saccharomyces cerevisiae CEC01; SCA: Ningxia Saccharomyces cerevisiae CECA; S96: Saccharomyces cerevisiae AWRI 796) using a high-throughput sequencing technique. The results showed that 227 bacterial genera and 20 fungi genera were shared in all samples, consisting of Saccharomyces, … …American Journal of Biochemistry and Biotechnology, Vol. 17, Issue 4 · 24 Dec 2021 · 5,997 accessesView PDFCite
Review ArticleOpen accessIn the abstractCriniviruses at the Crossroads of Virology and Agroecology: Molecular Dialogues, Vector Synchrony, and Translational Control Strategies in Crop SystemsMd. Abdullah Al Sabbir, Nabela Akter, Ankita Saha, Md. Motaher HossainCriniviruses, members of the Closteroviridae, illustrate how molecular evolution, vector ecology, and climatic variability converge to determine plant virus emergence and persistence. Although individual genomic and transmission traits are well studied, their cross-scale integration has remained limited. Recent advances in comparative genomics and high-throughput sequencing have revealed that bipartite genome reassortment, recombination hotspots, and quasi-species microdiversity provide the genetic flexibility … …OnLine Journal of Biological Sciences, Vol. 26, Issue 3 · 22 Sep 2026 · 469 accessesView PDFCite
Research ArticleOpen accessIn the abstractEffects of Maize Potato Intercropping and Different Fertilization Methods on Rhizosphere Soil Microorganisms and Yield of PotatoHuanjin Ma, Shengguang Xu et al.A field experiment with three replicates was conducted to explore the effects of maize-potato intercropping and different nitrogen application strategies on rhizosphere soil microorganisms and potato yield. Microbial community analysis was based on relative abundance. Maize-potato intercropping improves land use efficiency, yet how differentiated nitrogen management regulates rhizosphere microecology and potato productivity in this system remains unclear. Clarifying nitrogen-mediated shifts … …American Journal of Biochemistry and Biotechnology, Vol. 22, Issue 3 · 14 Sep 2026 · 790 accessesView PDFCite
Research ArticleOpen accessIn the abstractCoupling Analysis of Thermodynamic Equilibrium of Mass Transfer and Microbial Community Succession in Multiphase System of Dark Tea Solid-State FermentationZhanjun Liu, Jiawei Sun, Taotao Li et al.During the solid-state fermentation of dark tea, the limited material migration, the dynamic evolution of the thermodynamic equilibrium state, and the highly dynamic succession of the microbial community make it difficult to analyze the quality formation mechanism systematically. Traditional research has focused on microbial diversity or sensory quality analysis, lacking a systematic discussion on the regulatory effects of material migration … …American Journal of Biochemistry and Biotechnology, Vol. 22, Issue 3 · 10 Aug 2026 · 1,004 accessesView PDFCite
Research ArticleOpen accessIn the abstractAnalysis of the Impact of Acidity and Alkalinity on the Microbial Community Structure in Urban RiversDongmei Shen, Cairui Yu, Xinwei Song et al.To address the impact of low-temperature pH on the microbial community structure of river sediment in urban rivers during winter, the sediment of the Pi River was sampled to investigate. Four experimental samples were designed by varying the pH to 5.0, 7.0, and 8.5 based on the original sample (pH = 5.5) and the characteristics of the microbial community were … …American Journal of Biochemistry and Biotechnology, Vol. 19, Issue 3 · 8 Aug 2023 · 4,959 accessesView PDFCite
Research ArticleOpen accessIn the abstractRole of the Wnt/β-Catenin Signaling Pathway in Reducing Lipogenesis of Obese Rats Under Hypoxic ExercisePeiming Xu, Zhiyuan Sun, Xiaoyi Tian et al.Hypoxic exercise exerts a significant effect on body weight loss and body fat reduction. Methods: In the present study, we constructed an obese rat model and divided rats into the following groups: Normoxic quiet (C), Hypoxic quiet (H), Normoxic Exercise (CE), and Hypoxic Exercise (HE). We employed isobaric tags for relative and absolute quantification (iTRAQ) using proteomic technology to screen … …American Journal of Biochemistry and Biotechnology, Vol. 18, Issue 2 · 3 Jun 2022 · 5,737 accessesView PDFCite
Research ArticleOpen accessIn the abstractAnthelmintic Treatment in Growing Cattle: A Preliminary Study on the Effect of Ricobendazole on the Fecal MicrobiomePablo Rovira, Pablo LorenzoThere is limited information on the impact that anthelmintic treatments exert on the fecal microbiome of growing cattle. This study characterizes the composition and metabolic function of the cattle gut microbiome associated with different levels of parasite Fecal Egg Counts (FEC) and characterizes the fecal microbiome before and after ricobendazole-treatment. The hypothesis was that FEC levels and ricobendazole treatment (8 … …American Journal of Animal and Veterinary Sciences, Vol. 17, Issue 1 · 31 Mar 2022 · 6,340 accessesView PDFCite
Research ArticleOpen accessIn the abstractExperimental Study on the Microbial Community Structure of the Sediment of Pi River under the Different pH in WinterCairui Yu, Dongmei Shen, Wanfeng Wang et al.In order to solve the poor self-purification ability of low temperature water in winter, the microbial community structure in the sediment of Pi River water (located in West Anhui) was investigated experimentally in this study. Firstly, the sediment was sampled in the lower reaches of Pi River and prepared with the different pH (5.0, 5.5, 7.0 and 8.5); secondly, the … …American Journal of Biochemistry and Biotechnology, Vol. 17, Issue 1 · 15 Mar 2021 · 6,122 accessesView PDFCite
Research ArticleOpen accessIn the abstractEssential Proteins Discovery Methods based on the Protein-Protein Interaction NetworksLingZhi Zhu, Junling Zhang, Lingya He et al.Essential proteins are closely related to biological survival or reproduction and have important application value in respect of the location of disease genes, disease diagnosis and treatment, drug design. In order to discovery essential proteins, the researchers have proposed experimental approaches, but these methods require laborious and time consuming. With the development of high-throughput sequencing techniques, plenty of computational methods … …American Journal of Biochemistry and Biotechnology, Vol. 13, Issue 4 · 1 Jan 2018 · 8,891 accessesView PDFCite