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42 results for “Molecular Dynamics (MD)”
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Research ArticleOpen accessIn the abstractProposal of a Genome Editing System for Genetic Resistance to Tomato Spotted Wilt VirusFederico Martinelli, Giovanni Grillone, Filippo SgroiViruses provoke considerable economical losses in agriculture. New molecular approaches to develop genetic resistance based on translational genomics and precision genetic modifications are highly expected. The type II Clustered, Regularly Interspaced Palindromic Repeats (CRISPR) system including Cas9 nuclease represent a promising and very powerful tool to specifically modulate the expression and activity of genes involved in biotic stress responses. In … …American Journal of Applied Sciences, Vol. 11, Issue 11 · 7 Jan 2015 · 7,685 accessesView PDFCite
EditorialOpen accessIn the abstractAre Heat Shock Proteins Druggable Candidates?Tawanda Zininga, Addmore ShonhaiBanumathy, G., V. Singh, S.R. Pavithra and U. Tatu, 2003. Heat shock protein 90 function is essential for Plasmodium falciparum growth in human erythrocytes. J. Biol. Chem., 278: 18336-18345. DOI: 10.1074/jbc.M211309200 Brehmer, D., S. Rudiger, C.S. Gassler, D. Klostermeier and L. Packschies et al., 2001. Tuning of chaperone activity of Hsp70 proteins by modulation of nucleotide exchange. Nature Structural Molecular … …American Journal of Biochemistry and Biotechnology, Vol. 10, Issue 4 · 2 Dec 2014 · 8,166 accessesView PDFCite
Research ArticleOpen accessIn the abstractAnalysis of Resistance to Human Immunodeficiency Virus Protease Inhibitors Using Molecular Mechanics and Machine Learning StrategiesA. Harishchander, D. Alex Anand, Sanjib SenapatiProblem statement: Drug resistance is the most important factor, which influences the failure of current HIV therapies. So, the ability to predict the drug resistance of HIV-1 protease mutants will be useful in developing more effective and longer lasting treatment regimens. Approach: Drug resistance of HIV-1 protease is predicted with two current protease inhibitors (Indinavir and Saquinavir). The problem was … …Current Research in Medicine, Vol. 1, Issue 2 · 31 Oct 2010 · 7,204 accessesView PDFCite
Research ArticleOpen accessIn the abstractGravity Assist and Scattering off AGB Stars off Molecular CloudsAhmad Hashem AbdelhadiThe scattering of stellar orbits by galactic molecular clouds is studied in hope of explaining isotopic peculiarities of presolar grains from Asymptotic Giant Branch (AGB) stars. Silicon isotopic anomalies found in the mainstream Silicon Carbide (SiC) grains are observed to have heavy isotopes enriched. To explain the isotopic heaviness I propose that AGB stars that formed in the interior region … …American Journal of Applied Sciences, Vol. 6, Issue 4 · 30 Apr 2009 · 7,420 accessesView PDFCite
Review ArticleOpen accessIn the abstractMulti-Timescale Microscopic Theory for Radiation Degradation of Electronic and Optoelectronic DevicesDanhong Huang, Fei Gao, D.A. Cardimona et al.A multi-timescale hybrid model is proposed to study microscopically the degraded performance of electronic devices, covering three individual stages of radiation effects studies, including ultra-fast displacement cascade, intermediate defect stabilization and cluster formation, as well as slow defect reaction and migration. Realistic interatomic potentials are employed in molecular-dynamics calculations for the first two stages up to 100 ns as well … …Space Science International, Vol. 3, Issue 1 · 15 Jun 2015 · 10,235 accessesView PDFCite
Literature ReviewOpen accessAll words, across the recordMolecular Genetic Basis of Starch Biosynthesis and Waxy Allelic Variation in Rice Grain QualityInnabat Sartbayeva, Aigul Amirova, Dana Mynbaeva et al.The culinary, nutritional, and industrial properties of rice (Oryza sativa L.) grains are fundamentally governed by the structural arrangement of endosperm starch, a complex physiological phenotype shaped by genetic architecture and environmental conditions. This review provides a comprehensive synthesis of the molecular pathways driving starch biosynthesis in rice, centering on allelic diversity within the Waxy (Wx) locus, which codes for … …OnLine Journal of Biological Sciences, Vol. 26, Issue 3 · 22 Sep 2026 · 479 accessesView PDFCite
Review ArticleOpen accessAll words, across the recordCriniviruses at the Crossroads of Virology and Agroecology: Molecular Dialogues, Vector Synchrony, and Translational Control Strategies in Crop SystemsMd. Abdullah Al Sabbir, Nabela Akter, Ankita Saha, Md. Motaher HossainCriniviruses, members of the Closteroviridae, illustrate how molecular evolution, vector ecology, and climatic variability converge to determine plant virus emergence and persistence. Although individual genomic and transmission traits are well studied, their cross-scale integration has remained limited. Recent advances in comparative genomics and high-throughput sequencing have revealed that bipartite genome reassortment, recombination hotspots, and quasi-species microdiversity provide the genetic flexibility … …OnLine Journal of Biological Sciences, Vol. 26, Issue 3 · 22 Sep 2026 · 469 accessesView PDFCite