45 results for “test sequence”

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Research ArticleOpen accessIn the abstractImproving Protein 3D Structure Prediction Accuracy using Dense Regions Areas of Secondary Structures in the Contact MapAmer F. Al-Badarneh, Mohammad A. Khalil, Mo'taz A. Al-HamiProblem Statement: The protein folding problem is a fundamental problem in structural molecular biology. This problem describes how a protein is transformed from its primary sequence (i.e., amino acid sequence) into the three dimensional structure (3D structure) for this sequence that determines the function of the protein. The 3D structure of a protein can be represented using a square symmetrical … …American Journal of Biochemistry and Biotechnology, Vol. 4, Issue 4 · 31 Dec 2008 · 7,537 accessesView PDF Cite

Research ArticleOpen accessIn the abstractThe Dynamic of Afamin and Alpha-Fetoprotein Expression during Rat Liver DevelopmentIndriyani, Isabella Kurnia Liem, Puspita Eka Wuyung et al.Liver has a high level of Alpha-fetoprotein which is assumed to be important for mammalian development. However, Alpha-fetoprotein knockout studies in mice suggested that despite the absence of Alpha-fetoprotein, mice developed normally; the only abnormality observed was infertility in female mice. There are indications that Afamin, a protein that has a gene sequence located on the same chromosome as Alpha-fetoprotein, … …OnLine Journal of Biological Sciences, Vol. 21, Issue 1 · 5 Feb 2021 · 6,771 accessesView PDF Cite

Research ArticleOpen accessIn the abstractAccessing the Appropriateness of a Spatial Regression Using Generalized (h1h2-)Slepian Random FieldWayan Somayasa, Jamhir Safani, La Ode Ngkoimani, Muhamad Zamrun F.In this study we derived asymptotic goodness-of-fit test (model check) for spatial regression where the critical region as well as the p-value of the tests are approximated based on the distribution of a type of the integral functional of the generalized (h1h2-)-Slepian field and the set-indexed Gaussian white noise. Such random fields are obtained as the limit process of the … …Journal of Mathematics and Statistics, Vol. 13, Issue 2 · 2 May 2017 · 7,364 accessesView PDF Cite

Research ArticleOpen accessIn the abstractSevere and Fatal Influenza Cases in Russia in 2014-2015Svetlana V. Svyatchenko, Alexander G. Durymanov, Ivan M. Susloparov et al.This paper aims to characterize herd immunity of the population inhabiting Asian part of Russia before influenza epidemic and to describe influenza viruses isolated from severe cases including cases with fatal outcomes in the 2014-2015 epidemic season. HI test enabled us to study 3888 serum samples from healthy individuals including 1939 samples collected from poultry farm workers. We showed that … …OnLine Journal of Biological Sciences, Vol. 16, Issue 4 · 24 Dec 2016 · 7,069 accessesView PDF Cite

Research ArticleOpen accessIn the abstractBioactive Endophytic Actinomycetes of Cinnamomum sp.; Isolation, Identification, Activity Guided Purification and Process Optimization of Active MetaboliteSudipta Roy, Debdulal BanerjeeStudying on endophytic actinomycetes of Cinnamomum sp. from Indian rainforest, Cherapunji, one of our isolated strains designated as CH1 was found to produce significant antibacterial activity against test pathogens (Aeromonas caviae (ATCC 15468), Vibrio parahemolyticus ATCC 1782, Pseudomonas aeruginosa (ATCC 9027), Proteus vulgaris (ATCC 12453), Shigella flexnerii (ATCC 12022), Escherichia coli (human sample isolate), Bacillus subtilis (ATCC 11774) and Bacillus … …Current Research in Microbiology, Vol. 6, Issue 1 · 6 Apr 2015 · 9,063 accessesView PDF Cite

Research ArticleOpen accessIn the abstractIdentification and Characterization of Antibiotic-Producing Actinomycetes IsolatesMeera Kumari, Bat-Erdene Myagmarjav, Birendra Prasad, Madhusudan ChoudharyActinomycetes are a gram-positive, filamentous subgroup of bacteria most known for antibiotic production. In fact, most of the antibiotics available today have originated from actinomycetes, namely from the genus Streptomyces. Novel bacteria with antimicrobial activities have been discovered from bacterial screen studies for decades and there is still much more yet to be unearthed. One hundred seventy five strains of … …Current Research in Microbiology, Vol. 4, Issue 1 · 25 Jun 2013 · 15,441 accessesView PDF Cite

Research ArticleOpen accessIn the abstractEfficient Face Recognition in Video by Bit Planes SlicingM. Jasmine Pemeena Priyadarsini, K. Murugesan, Srinivasa Rao Inbathini, Visal KumarProblem statement: Video-based face recognition must be able to overcome the imaging interference such as pose and illumination. Approach: A model is designed to study for face recognition based on video sequence and also test image. In training stage, single frontal image is taken as a input to the recognition system. A new virtual image is generated using bit plane … …Journal of Computer Science, Vol. 8, Issue 1 · 26 Oct 2011 · 7,426 accessesView PDF Cite

Research ArticleOpen accessIn the abstractImplementing a Hybrid VMD–BiTCN–BiGRU Architecture With Intelligent Optimization for Agricultural Commodity Price Prognostication in Gujarat MarketsJignesh Hirapara, Ratnesh Kumar Namdeo, Ankit Kumar Dubey et al.In the agricultural sector, the prices of pulses require adequate forecasting to plan farming activities, store and market, and guide policy-making. However, the pulse price series is highly volatile, seasonal, nonstationary, and nonlinear, and thus conventional linear time series models are not necessarily very effective. In the suggested framework, the raw price data series is decomposed using Variational Mode Decomposition … …Journal of Computer Science, Vol. 22, Issue 7 · 1 Aug 2026 · 1,042 accessesView PDF Cite

Research ArticleOpen accessIn the abstractMolecular Identification of Domestic and Wild Boars Using Cytochrome-b Specific Primers for Halal AuthenticationRifqi, Edi Suryanto, Ari Surya Sukarno et al.The subject of adulterating wild boar and pig meat products with other animal meat is delicate, particularly in the Muslim nation of Indonesia. In recent years, there has been a lot of concern over halal meat products that contain wild boar and pig meat due to Economically Motivated Adulteration (EMA). However, there are limited studies of PCR-DNA-based to discriminate between … …American Journal of Animal and Veterinary Sciences, Vol. 20, Issue 3 · 14 Nov 2025 · 2,388 accessesView PDF Cite

Research ArticleOpen accessIn the abstractOptimization and Molecular Identification of Protease-Producing Thermophilic Bacterial Isolate TUA-26Anthoni Agustien, Mufidhatul Muqarramah, Feskaharny AlamsjahProtease enzymes are used as biocatalysts that can accelerate a reaction. Thermostable enzymes produced by thermophilic bacteria are needed in the industrial field because of their ability to withstand high temperatures. The thermophilic bacterial isolate TUA-26 that produces protease was to analyze the optimum conditions of temperature, pH, agitation, trace elements, carbon sources, and nitrogen sources; the stability of protease … …OnLine Journal of Biological Sciences, Vol. 24, Issue 3 · 6 Apr 2024 · 4,937 accessesView PDF Cite