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72 articles for “DNA Sequence”
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Research ArticleOpen accessIn the abstractThe COXII Haplotypes and their Association with Productive Traits in Large White Breed PigsMaria A. Kolosova, Lyubov V. Getmantseva, Nekruz F. Bakoev et al.The mitochondrial genome encodes key electron transfer chain (ETC) proteins which produce the vast majority of cellular ATP. Sequence analysis of maternal inherited mitochondrial DNA is an effective way to assess the individual characteristics of commercial breeding lines of pigs. The aims of our study were to analyze the nucleotide sequence of the mitochondrial gene COXII in Large White pigs, … …OnLine Journal of Biological Sciences, Vol. 19, Issue 3 · 2 Jul 2019 · 7,655 accessesView PDFCite
Research ArticleOpen accessIn the abstractA Selection-based MCL Clustering Algorithm for Motif DiscoveryChunxiao Sun, Zhiyong Zhang, Jinglei Tang, Shuai LiuAs motif discovery plays an important role in the understanding of the relationship of gene regulation, this paper puts forward a selection-based MCL clustering refinement algorithm (SMCLR) aiming at solving the planted (l, d) motif search (PMS) problem. Firstly, we divide the DNA dataset into different subsets through selection of reference sequence and screen parts of eligible subsets by setting … …American Journal of Biochemistry and Biotechnology, Vol. 14, Issue 4 · 1 Jan 2019 · 8,827 accessesView PDFCite
Research ArticleOpen accessIn the abstractCharacterization of Mi1.2 Whitefly (Bemisia tabaci) Resistance GeneSherin Amin Mahfouze, Shipra Saxena, Heba Amin Mahfouze, Manchikatla Venkat RajamTomato (Solanum peruvianum) Mi gene provides resistance to whitefly (Bemisia tabaci), potato aphids and nematode making Mi a useful source in integrated pest management program. The aim of this work was to isolate, clone and sequence Mi1.2 gene from S. peruvianum. In addition, physico-chemical identification of amino acids deduced from Mi1.2 gene was done. Secondary (2D) and tertiary (3D) structures … …OnLine Journal of Biological Sciences, Vol. 17, Issue 4 · 15 Nov 2017 · 7,793 accessesView PDFCite
Research ArticleOpen accessIn the abstractSequence Analysis of VP2 Gene of the Parvoviruses Isolated from Fecal Samples of Domestic Cats in Tehran, IranNegin Jahanbin, Shahram Jamshidi, Omid MadadgarPanleukopenia is a viral enteritis of high mortality rate in Feline population. It is caused by a small single-stranded DNA virus, belonging to the Family Parvoviridae, called Feline Panleukopenia Virus (FPV). Parvoviruses are capable of adapting to new hosts and can simply mutate like RNA viruses, resulting in the emergence of different strains with antigenic changes. Unlike the original Canine … …American Journal of Animal and Veterinary Sciences, Vol. 12, Issue 4 · 28 Oct 2017 · 7,693 accessesView PDFCite
Research ArticleOpen accessIn the abstractThe Investigation of Organelle Genomes of Extra Nuclear Sunflower Mutants with Variegated PhenotypeIrina Dremuk, Nikolay Kozel, Mariya Logacheva et al.The comparative analysis of complete chloroplast and mitochondrial DNA sequences of the original inbred line 3629 and three extra nuclear mutant lines variegated-1, variegated-15, variegated-17, obtained by the N-nitroso-N-methylurea induced mutagenesis, was done. The studied mutant lines were presented two different phenotypes with diverse chlorophyll content: Pale/green mutant line variegated-17 with 1.8% relative (to 3629 line) chlorophyll content in mutant … …American Journal of Biochemistry and Biotechnology, Vol. 13, Issue 4 · 24 Oct 2017 · 7,633 accessesView PDFCite
Research ArticleOpen accessIn the abstractPhylogenetic of ERIC-DNA Fingerprinting and New Sequencing of Aeromonas Species and V. Cholerae DNAHawraa Natiq Kabroot AL-Fatlawy, Hawraa Abdalameer Aldahhan, Ali Hmood AlsaadiThe current study included 44 isolate of A. hydrophila, A. sobria and V. cholerae and other bacteria isolated from stool samples and environmental samples (Kufa river water and hospital environmental samples). ERIC DNA Fingerprinting with ERIC primers pairs generated distinct amplification bands ranging in size from (87 bp to 8000 kb). The 44 isolates produced 93 different patterns by ERIC … …American Journal of Applied Sciences, Vol. 14, Issue 10 · 5 May 2017 · 7,801 accessesView PDFCite
Research ArticleOpen accessIn the abstractSwarm Optimization Techniques for Segmenting Gel Electrophoresis ImagesSara Ibrahim Ibrahim, Mohamed Abd Allah Makhlouf, Ghada.S. El-Tawel, M.E. WahedGel Electrophoresis (GE) are discussed as the main tool to dissociate DNA sequences. It helps in analyzing the genome such that each image resulting from it consists of lanes that include several bands. Image segmentation plays the foremost role in image processing. It helps in producing accurate results in medical diagnosis. Image segmentation works by dividing an image into regions … …Current Research in Bioinformatics, Vol. 5, Issue 1 · 18 Jun 2016 · 8,092 accessesView PDFCite
Research ArticleOpen accessIn the abstractVariability of Chloroplast DNA of Extranuclear Sunflower MutantsMarkin Nicolay, Aieksandr Usatov, Maria Logacheva et al.A comparative analysis of full-genome sequences of chloroplast DNA (cpDNA) of the original inbred line 3629 and three extranuclear mutants, which were obtained by the method of mutagenesis induced with N-nitroso-N-methylurea (NMU) and characterized by different level of chlorophyll insufficiency (en:chlorina-7-yellow-green leaves; chlorophyll content (a + b)-67.8% with respect to the line 3629, variegated-10-leaves with white zones; chlorophyll content (a … …American Journal of Biochemistry and Biotechnology, Vol. 12, Issue 1 · 26 Mar 2016 · 7,269 accessesView PDFCite
Research ArticleOpen accessIn the abstractComparative Genomics of Domesticated and Wild Sunflower: Complete Chloroplast and Mitochondrial GenomesM. S. Makarenko, A. V. Usatov, N. V. Markin et al.The entire chloroplast and mitochondrial genomes of domesticated and wild type sunflower were sequenced. The comparative analysis of chloroplast genomes revealed 43 variant sites, including 21 polymorphic SSR loci and 22 SNPs. About 14 variant sites were found by collation of mitochondrial DNA (mtDNA), among them 4 SSRs, 8 SNPs and 2 deletions. About 9 SNPs were located in coding … …OnLine Journal of Biological Sciences, Vol. 16, Issue 1 · 29 Feb 2016 · 7,775 accessesView PDFCite
EditorialOpen accessIn the abstractCommentary-How do we Improve Training for Receptor Research?Marilee Ann BenoreThis issue of the American Journal of Biochemistry and Biotechnology features articles about receptor-ligand interactions that are critical to the wellbeing of all living organisms. The importance of the field of receptor research is supported by the large number of articles published in journals, the numerous specialty journals, the international conferences and the percentage of legal drugs on the market … …American Journal of Biochemistry and Biotechnology, Vol. 11, Issue 4 · 8 Dec 2015 · 8,056 accessesView PDFCite