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127 articles for “Sequence Analysis”

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Research ArticleOpen accessIn the keywordsTaxonomically Clustering Organisms Based on the Profiles of Gene Sequences Using PCAE. Ramaraj, M. PunithavalliThe biological implications of bioinformatics can already be seen in various implementations. Biological taxonomy may seem like a simple science in which the biologists merely observe similarities among organisms and construct classifications according to those similarities[1], but it is not so simple. By applying data mining techniques on gene sequence database we can cluster the data to find interesting similarities … …Journal of Computer Science, Vol. 2, Issue 3 · 31 Mar 2006 · 6,746 accessesView PDFCite
Research ArticleOpen accessIn the keywordsConcordance and Term Frequency in Analyzing API Calls for Malware Behavior DetectionNur Hilda Amira Abd Wahab, Masnizah Mohd, Ravie Chandren Muniyandi et al.Application Programming Interface (API) is used for the software to interact with an operating system to do certain task such as opening file, deleting file and many more. Programmers use this API to make it easier for their program to communicate with the operating system without having the knowledge of the hardware of the target system. Malware author is an … …Journal of Computer Science, Vol. 15, Issue 9 · 25 Sep 2019 · 7,784 accessesView PDFCite
Research ArticleOpen accessIn the keywordsA Novel 2D Graphical Representation and its Application in the Similarities/Dissimilarities Analysis of Protein SequencesXianyou ZhuIn this study, a novel 2D graphical representation of protein sequences is proposed based on the physicochemical feature pK2 of amino acids first and then, on the basis of the newly given 2D graphical representation, a new concept of feature appearance model is introduced to analyze the similarity/dissimilarity of protein sequences. Finally, Theoretical and simulation results show that the newly … …American Journal of Biochemistry and Biotechnology, Vol. 12, Issue 1 · 17 Mar 2016 · 6,964 accessesView PDFCite
Research ArticleOpen accessIn the keywordsSeparation and Identification of Two Fungal Strains in Stored MaizeXiaoyu Yue, Lynne McLandsborough, Jian Zou, Xueqin GaoThe microbiological spoilage of stored grain is important for human health and economic loss. Two major predominant grain spoilage fungi (M15 and M16) were isolated from maize from a granary in China. Morphological observation of the fungal isolates, analysis of their ITS sequences and construction of their phylogenetic trees were conducted on these two strains, which were identified as Fusarium … …American Journal of Biochemistry and Biotechnology, Vol. 13, Issue 3 · 3 Aug 2017 · 7,331 accessesView PDFCite
Research ArticleOpen accessIn the abstractMolecular Identification and Antioxidant Profiling of Penicillium heteringtonii EUA-017 from Mangrove (Avicennia alba) in West Sumatra, IndonesiaAnthoni Agustien, Djong Hon Tjong, Yetria Rilda et al.Mangrove ecosystems harbor diverse endophytic fungi that produce bioactive secondary metabolites with potential antioxidant activities. This study aimed to identify an endophytic fungal isolate (EUA-017) from Avicennia alba mangroves in West Sumatra, Indonesia, and characterize its antioxidant metabolites. Molecular identification was performed using internal transcribed spacer (ITS) region sequencing. Secondary metabolites from ethyl acetate extracts were characterized using Fourier-transform infrared … …OnLine Journal of Biological Sciences, Vol. 25, Issue 4 · 25 Mar 2026 · 1,410 accessesView PDFCite
Research ArticleOpen accessIn the abstractA CNN-KNN Based Recognition of Online Handwritten Symbols within Physics Expressions Using Contour-Based Bounding Box (CBBS) Segmentation TechniqueUjwala Kolte, Sachin Naik, Vidya KumbharArtieres, T., Marukatat, S., & Gallinari, P. (2007). Online Handwritten Shape Recognition Using Segmental Hidden Markov Models. IEEE Transactions on Pattern Analysis and Machine Intelligence, 29(2), 205–217. https://doi.org/10.1109/tpami.2007.38 Baró, A., Riba, P., Calvo-Zaragoza, J., & Fornés, A. (2019). From Optical Music Recognition to Handwritten Music Recognition: A baseline. Pattern Recognition Letters, 123, 1–8. https://doi.org/10.1016/j.patrec.2019.02.029 Bresler, M., Prua, D., & Hlavác, … …Journal of Computer Science, Vol. 20, Issue 7 · 7 May 2024 · 6,278 accessesView PDFCite
Research ArticleOpen accessIn the abstractComparative Genomics of Xylella fastidiosa Subsp. Pauca and Insights on its Current and Potential Movements in EcuadorCarlos Bolanos-Carriel, Eliana Granja Guerra, Jaris Veneros et al.Xylella fastidiosa subsp. Pauca causes Coffee Leaf Scorch (CLS). It is a major threat to coffee production in most South and Central American countries. X. fastidiosa is prone to intersubspecific recombination, and it is believed that this species became pathogenic in citrus and coffee due to recent mutation events and gene flow between closely related strains. CLS epidemics have not … …OnLine Journal of Biological Sciences, Vol. 25, Issue 1 · 23 Nov 2024 · 6,172 accessesView PDFCite
Research ArticleOpen accessIn the abstractPollution Characteristics and Sources Analysis of Soil Heavy Metal in Taoyuan Coal Mine of Suzhou CityHaimin SuSoil is one of the most important resources and an important part of ecosystem in the development of human survival. The purposes of this study are to investigate concentration characteristics and sources analysis of heavy metals in Taoyuan coal mine of Suzhou City. 30 soil samples were collected and characterized for metal concentration (Cd, Cr, Cu, Pb, Zn and As), … …American Journal of Biochemistry and Biotechnology, Vol. 18, Issue 1 · 29 Jan 2022 · 5,914 accessesView PDFCite
Review ArticleOpen accessIn the abstractThe Popular Fuzzy-TOPSIS as the Main Method for Decision Model: An Object-Driven Model for Bibliometric-Based Literature ReviewDitdit Nugeraha UtamaFuzzy logic serves as a computational modeling method, particularly prominent in the research domain of decision models. To assess the prevalent trends in the utilization of fuzzy logic in the research landscape of decision models and its common combinations with other methods, a conceptual model for article review was developed. This study involved three simple stages: Bibliometric analysis, article review … …Journal of Computer Science, Vol. 20, Issue 11 · 11 Sep 2024 · 4,811 accessesView PDFCite
Research ArticleOpen accessIn the abstractPredicting Support and Resistance Indicators for Stock Market with Fibonacci Sequence in Long Short-Term MemoryThambusamy Velmurugan, Thiruvalluvan IndhumathyPredictive data analytics is a branch of data analytics where models are designed that effectively interpret; anticipate outcomes by analyzing present data to make predictions about future. One of the major attributes for prediction is time and there have been a considerable number of time series analytical models that are used for forecasting. Long Short-Term Memory (LSTM) is a deep … …Journal of Computer Science, Vol. 16, Issue 10 · 28 Oct 2020 · 7,316 accessesView PDFCite