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172 results for “Residue”
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Research ArticleOpen accessIn the abstractImproving Protein 3D Structure Prediction Accuracy using Dense Regions Areas of Secondary Structures in the Contact MapAmer F. Al-Badarneh, Mohammad A. Khalil, Mo'taz A. Al-HamiProblem Statement: The protein folding problem is a fundamental problem in structural molecular biology. This problem describes how a protein is transformed from its primary sequence (i.e., amino acid sequence) into the three dimensional structure (3D structure) for this sequence that determines the function of the protein. The 3D structure of a protein can be represented using a square symmetrical … …American Journal of Biochemistry and Biotechnology, Vol. 4, Issue 4 · 31 Dec 2008 · 7,533 accessesView PDFCite
Research ArticleOpen accessIn the abstractFarmers' Use of Integrated Soil Fertility and Nutrient Management Practices for Sustainable Crop Production: A Field-level Study in BangladeshM. Golam Farouque, Hiroyuki TekeyaProblem statement: The most pressing problem for Bangladesh agriculture is the current state of gradual decreasing of soil fertility, stagnating crop yields and declining productivity in a range of food crops. According to crop production scientists, Integrated Soil Fertility (ISF) and Nutrient Management (NM) is an advanced approach that can serve as a remedy to improve crop yields and to … …American Journal of Agricultural and Biological Sciences, Vol. 3, Issue 4 · 31 Dec 2008 · 7,812 accessesView PDFCite
Research ArticleOpen accessIn the abstractValorization of Drinking Water Treatment Sludges as Raw Materials to Produce Concrete and MortarR.M. Ramirez Zamora, O. Ceron Alfaro, N. Cabirol et al.The purpose of this work was to assess the technical feasibility to valorize sludges, generated and stored at the Los Berros drinking water facility (PPLB), as raw material to produce building products (mortar and concrete) for the construction industry. The experimental study was divided into three stages: 1) sampling and characterization of PPLB sludges to determine their potential as raw … …American Journal of Environmental Sciences, Vol. 4, Issue 3 · 30 Jun 2008 · 7,578 accessesView PDFCite
Research ArticleOpen accessIn the abstractRat Cardiomyocytes Express a Classical Epithelial Beta-DefensinAnnika Linde, Gerald H. Lushington, Frank Blecha, Tonatiuh MelgarejoBeta-defensins (BDs) are classical epithelial antimicrobial peptides of immediate importance in innate host defense. Since recent studies have suggested that certain BDs are also expressed in non-traditional tissues, including whole heart homogenate, and because effector molecules of innate immunity and inflammation can influence the development of certain cardiovascular disease processes, we hypothesized that BDs are produced by cardiomyocytes as a … …American Journal of Animal and Veterinary Sciences, Vol. 3, Issue 1 · 31 Mar 2008 · 6,994 accessesView PDFCite
Research ArticleOpen accessIn the abstractNimble Protein Sequence Alignment in Grid (NPSAG)K. Somasundaram, S. RadhakrishnanIn Bio-Informatics application, the analysis of protein sequence is a kind of computation driven science which has rapidly and quickly growing biological data. Also databases used in these applications are heterogeneous in nature and alignment of protein sequence using physical techniques is expensive, slow and results are not always guaranteed/accurate. So this application requires cross-platform, cost-effective and more computing power … …Journal of Computer Science, Vol. 4, Issue 1 · 31 Jan 2008 · 6,921 accessesView PDFCite
Research ArticleOpen accessIn the abstractFoundry Wastes Reuse and Recycling in Concrete ProductionSilvia Fiore, Maria Chiara ZanettiThe industrial process of a cast iron foundry plant located in the North of Italy was analyzed in order to determine the amount and kind of produced wastes. The main fractions are core and moulding sands, muds and powders from dust abatement plants, furnace and ladle slags, and exhaust lime, making about 750-800 t/d of residues for a production of … …American Journal of Environmental Sciences, Vol. 3, Issue 3 · 30 Sep 2007 · 7,952 accessesView PDFCite
Research ArticleOpen accessIn the abstractA Novel Heat Shock Transcription Factor Family in Entamoeba histolyticaConsuelo G. García, Ma. De la Luz Macias Argüelles, D. Guillermo P Ishiwara et al.The HSTF is a master molecule involved in the transcriptional control of several genes during different types of stress. This transcription factor is a very conserved protein identified in different organisms from bacterial to human. Entamoeba histolytica is the protozoan responsible for the human amoebiasis. This parasite is exposed to different kind of stress as changes in the pH, temperature, … …American Journal of Infectious Diseases, Vol. 3, Issue 2 · 30 Jun 2007 · 7,182 accessesView PDFCite
Research ArticleOpen accessIn the abstractPrediction of a Putative Functional Region in the Human Bax Protein by Computational AnalysisMaría Sánchez-Aguilar, Laurence A. Marchat, Absalom ZamoranoStructural domains are relevant elements for interactions between Bcl-2 family members to regulate apoptosis and cell survival. Although BH1-BH4 domains can be identified by their sequence and selective occurrence in Bcl-2-family members, structural regions have not been entirely determined yet. The functional residues of Bax, the most representative pro-apoptotic protein of the human Bcl-2 family, remain almost unknown. Here, we … …American Journal of Infectious Diseases, Vol. 3, Issue 2 · 30 Jun 2007 · 7,230 accessesView PDFCite
Research ArticleOpen accessIn the abstractExpression, Purification and Activity Assay of Two New Recombinant Antagonists of Fibrinogen ReceptorJianbo Yang, Jia Yao, Kun Yang et al.The gene sequence of Decorsin which is extracted from a kind of North American leeches was synthesized. Two recombinant proteins, Annexin V plus Decorsin (AnnV-D39) and Annexin V plus the carboxyl terminal 27 amino acid residues of Decorsin(AnnV-D27), were constructed. And a 10 amino acids linker peptide of GGGGSGGGGS was inserted between Annexin V and Decorsin in AnnV-D39. Using pET-28(a+) … …American Journal of Biochemistry and Biotechnology, Vol. 1, Issue 2 · 30 Jun 2005 · 6,913 accessesView PDFCite
Research ArticleOpen accessIn the abstractBinding of the scutellarin to albumin using tryptophan fluorescence quenching, CD and FT-IR spectraJianniao Tian, Jiaqin Liu, Zhide Hu, Xingguo ChenThe binding of scutellarin with bovine serum albumin (BSA) was investigated at three temperatures, 296k, 310K, and 318K, by the fluorescence, circular dichroism (CD) and fourier transform infrared spectroscopy (FT-IR) at pH 7.40. The binding parameters were determined by Stern-Volmer equation. The thermodynamic parameters were calculated according to the dependence of enthalpy change on the temperature as follows:ΔH0 and ΔS0 … …American Journal of Immunology, Vol. 1, Issue 1 · 31 Mar 2005 · 13,643 accessesView PDFCite